Changes in version 1.3.0 (2026-03-15)                  

What's new:

  - Reversed operand order when calculating bias in ba_analysis
  - Added a reintegration function
  - Updated ggplot2 code and dependency
  - Modernized roxygen2 usage

                 Changes in version 1.2.1 (2025-06-11)                  

What's new:

  - Minor revisions to DESCRIPTION
  - Filled in absent value fields in the documentation for various
    exported functions
  - Ensured all plot-option modifications are properly reset

                        Changes in version 1.2.0                        

What's new:

  - Primarily a re-release of 1.1.0 now that matchingMarkets is
    available again
  - Minor changes (e.g., URL fixes and updates to work with latest R
    versions)
  - Revdep checks removed since there are currently no reverse
    dependencies

                 Changes in version 1.1.0 (2022-08-21)                  

What's new:

  - Increased R dependency to 3.5.0
  - Added risk analysis for cardiovascular disease
  - Added Bland-Altman analysis function
  - Added functions for time series dataframes, to test for continuity,
    reduce to full days, and manage variable order
  - Added a function to determine epoch length
  - Continued to develop functionality related to resting energy
    expenditure and body mass index (the latter will eventually be moved
    to the anthropometry package -- see
    https://github.com/paulhibbing/anthropometry)
  - Added functionality for residual adjustment

                 Changes in version 1.0.1 (2020-05-17)                  

What's new:

  - Some minor modifications have been made to clean up internal code.

  - The transition pairing method unit tests have been temporarily
    suspended.

                        Changes in version 1.0.0                        

What's new:

  - Added a function (weight_status) to classify body mass index for
    adults using CDC cutoffs. (This can also be used as a wrapper for
    the existing function that classifies youth BMI based on CDC
    percentiles.)

  - Added Rcpp functions related to rolling windows (get_indices to
    extract indices for rolling windows; rolling_groups to extract
    rolling subsequences of raw data).

  - Removed dependency on orphaned clues package (resulting in changes
    to unit test cache)

                 Changes in version 0.3.1 (2019-12-16)                  

What's new:

  - Added a vignette for the Transition Pairing Method

                 Changes in version 0.3.0 (2019-10-29)                  

What's new:

  - Added paired equivalence testing functionality, including plot
    method
  - Added a function to classify activity intensity from metabolic
    equivalents and (if available) posture
  - Added a wrapper for base::rle that gives a data frame with original
    rle information, plus start/stop indices for each run
  - Added various performance indicators to summary.transition
  - Converted summary.transition output to an S4 framework, and added
    addition/subtraction methods
  - Added spurious curve generation functions
  - Adjusted Transition Pairing Method to make it more robust (e.g. to
    deal with missing values)

                 Changes in version 0.2.0 (2019-07-10)                  

What's new:

  - Removed unused dependency on package AGread
  - Added support for calculation of RMR via sliding window analysis
  - Added process management utility for easy messaging and timekeeping
  - Added tools to compare objects more specifically than via all.equal
  - Added na.rm = TRUE to the mean bias line on Bland-Altman plots
  - Added shape control as an option for Bland-Altman plots
  - Cleaned up TPM summary method
  - Added rejection of non-consecutive pairings to the TPM

                 Changes in version 0.1.2 (2019-03-06)                  

Summary

This is a second resubmission of version 0.1.0. The following changes
have been made:

  - Changed title to eliminate redundancy
  - Expanded the description field in DESCRIPTION to provide more detail
    about what the package does.
  - Swapped donttest{} in for dontrun{} in documentation where
    appropriate
  - Added detail to package documentation

                        Changes in version 0.1.1                        

Summary

This is a resubmission of version 0.1.0. The extraneous LICENSE file has
been removed.

                        Changes in version 0.1.0                        

Summary

This is the initial release of PAutilities. Current features include:

  - Bland-Altman plots
  - Bouted moderate-to-vigorous physical activity analysis
  - Formatted descriptive statistics
  - Demographic calculations (age, BMI-for-age percentile)
  - Metabolic calculations (energy expenditure conversions, basal
    metabolic rate predictions)
  - Analysis of bout detection algorithm performance